Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion effector protein (hcp) | BK658_19220 | Not Available | Negative | 4119767 - 4120267 | 17720.1 |
| evpb family type vi secretion protein | BK658_19225 | Not Available | Negative | 4120342 - 4121829 | 55187.5 |
| type vi secretion system-associated protein | BK658_19230 | Not Available | Negative | 4121858 - 4122418 | 20737.5 |
| type vi secretion protein | BK658_19235 | Not Available | Positive | 4122645 - 4123094 | 16645.8 |
| type vi secretion system-associated protein | BK658_19240 | Not Available | Positive | 4123158 - 4124489 | 48234.2 |
| type vi secretion system protein impk | BK658_19245 | Not Available | Positive | 4124508 - 4125275 | 28543.8 |
| type vi secretion system protein impl | BK658_19250 | Not Available | Positive | 4125272 - 4129093 | 142907.0 |
| type vi secretion protein | BK658_19255 | Not Available | Positive | 4129090 - 4130193 | 41707.8 |
| hydroxyacid dehydrogenase | BK658_19260 | Not Available | Negative | 4130210 - 4131160 | 33429.7 |
| cysteine hydrolase | BK658_19265 | Not Available | Negative | 4131343 - 4131867 | 19046.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
