Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_19170 | Not Available | Positive | 4108034 - 4108429 | 13295.9 |
| hypothetical protein | BK658_19175 | Not Available | Negative | 4108639 - 4109181 | 20420.2 |
| type iv secretion protein rhs | BK658_19180 | Not Available | Negative | 4109195 - 4111204 | 72594.8 |
| hypothetical protein | BK658_19185 | Not Available | Negative | 4111472 - 4112482 | 37513.5 |
| hypothetical protein | BK658_19190 | Not Available | Negative | 4112564 - 4113451 | 33247.3 |
| hypothetical protein | BK658_19195 | Not Available | Negative | 4113563 - 4113925 | 12914.3 |
| clpv1 family t6ss atpase | BK658_19200 | Not Available | Negative | 4113993 - 4116542 | 92688.5 |
| type vi secretion protein | BK658_19205 | Not Available | Negative | 4116545 - 4117570 | 37069.8 |
| type vi secretion system protein impg | BK658_19210 | Not Available | Negative | 4117534 - 4119324 | 66016.0 |
| type vi secretion protein | BK658_19215 | Not Available | Negative | 4119308 - 4119751 | 16711.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
