Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit alpha | BK658_18770 | Not Available | Negative | 4027206 - 4028081 | 30867.5 |
| abc transporter permease | BK658_18775 | Not Available | Negative | 4028078 - 4029034 | 33757.5 |
| abc transporter substrate-binding protein | BK658_18780 | Not Available | Negative | 4029083 - 4030720 | 59262.6 |
| fad-dependent oxidoreductase | BK658_18785 | Not Available | Negative | 4030813 - 4032087 | 45562.8 |
| haloacid dehalogenase, type ii | BK658_18790 | Not Available | Negative | 4032143 - 4032811 | 25159.1 |
| hypothetical protein | BK658_18795 | Not Available | Negative | 4033288 - 4033497 | 7675.23 |
| gnat family n-acetyltransferase | BK658_18800 | Not Available | Positive | 4033740 - 4034597 | 30487.8 |
| cupin | BK658_18805 | Not Available | Positive | 4034667 - 4035380 | 25295.0 |
| hypothetical protein | BK658_18810 | Not Available | Negative | 4035485 - 4035856 | 13409.8 |
| deaminase | BK658_18815 | Not Available | Negative | 4036218 - 4036754 | 19687.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
