Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit beta | BK658_18720 | Not Available | Positive | 4014644 - 4015828 | 43377.4 |
| gnat family n-acetyltransferase | BK658_18725 | Not Available | Positive | 4015888 - 4016745 | 30598.9 |
| aldehyde dehydrogenase family protein | BK658_18730 | Not Available | Positive | 4017012 - 4018499 | 52144.4 |
| tartrate dehydrogenase | BK658_18735 | Not Available | Negative | 4018559 - 4019638 | 39942.8 |
| succinate-semialdehyde dehydrogenase (nadp(+)) | BK658_18740 | Not Available | Negative | 4019665 - 4021122 | 52076.0 |
| acetylornithine deacetylase (arge) | BK658_18745 | Not Available | Negative | 4021380 - 4022537 | 41926.6 |
| sarcosine oxidase subunit beta | BK658_18750 | Not Available | Negative | 4022534 - 4023688 | 41977.4 |
| fad/nad(p)-binding oxidoreductase | BK658_18755 | Not Available | Negative | 4023685 - 4025076 | 49329.6 |
| nad(fad)-dependent dehydrogenase | BK658_18760 | Not Available | Negative | 4025058 - 4025366 | 11246.6 |
| abc transporter | BK658_18765 | Not Available | Negative | 4025363 - 4027204 | 66208.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
