Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dehydrogenase | BK658_18620 | Not Available | Negative | 3997091 - 3998041 | 35785.9 |
| rnd transporter | BK658_18625 | Not Available | Negative | 3998106 - 3999602 | 53429.8 |
| mfs transporter | BK658_18630 | Not Available | Negative | 3999622 - 4001121 | 53418.4 |
| hemolysin d | BK658_18635 | Not Available | Negative | 4001121 - 4002257 | 41560.2 |
| hypothetical protein | BK658_18640 | Not Available | Negative | 4002272 - 4002496 | 8201.96 |
| tetr family transcriptional regulator | BK658_18645 | Not Available | Positive | 4002515 - 4003138 | 22276.4 |
| mismatch-specific dna-glycosylase | BK658_18650 | Not Available | Positive | 4003176 - 4003700 | 19092.7 |
| lysr family transcriptional regulator | BK658_18655 | Not Available | Positive | 4003791 - 4004705 | 33958.7 |
| Trna-gln | Not Available | Not Available | Positive | 4004785 - 4004859 | Not Available |
| peroxidase | BK658_18665 | Not Available | Negative | 4005051 - 4005704 | 24160.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
