Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | BK658_18520 | Not Available | Negative | 3975943 - 3977061 | 39431.8 |
| histidine abc transporter substrate-binding protein | BK658_18525 | Not Available | Negative | 3977164 - 3978132 | 35443.6 |
| phytanoyl-coa dioxygenase | BK658_18530 | Not Available | Negative | 3978220 - 3979032 | 30994.0 |
| transcriptional regulator | BK658_18535 | Not Available | Positive | 3979142 - 3980056 | 33797.5 |
| histidine ammonia-lyase | BK658_18540 | Not Available | Negative | 3980292 - 3981815 | 54011.4 |
| hypothetical protein | BK658_18545 | Not Available | Negative | 3981956 - 3982780 | 30476.2 |
| abc transporter permease | BK658_18550 | Not Available | Negative | 3982777 - 3983628 | 30700.7 |
| histidine abc transporter substrate-binding protein | BK658_18555 | Not Available | Negative | 3983699 - 3984667 | 35193.3 |
| abc transporter permease | BK658_18560 | Not Available | Negative | 3985561 - 3986208 | 23263.1 |
| amino acid abc transporter permease | BK658_18565 | Not Available | Negative | 3986210 - 3986890 | 24605.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
