Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_18420 | Not Available | Negative | 3958679 - 3959011 | 12198.7 |
| lysr family transcriptional regulator | BK658_18425 | Not Available | Negative | 3960022 - 3960906 | 32560.7 |
| succinyl-coa--3-ketoacid-coa transferase | BK658_18430 | Not Available | Positive | 3961055 - 3961753 | 25037.1 |
| succinyl-coa--3-ketoacid-coa transferase | BK658_18435 | Not Available | Positive | 3961790 - 3962449 | 23338.6 |
| acetyl-coa acetyltransferase | BK658_18440 | Not Available | Positive | 3962473 - 3963654 | 40380.9 |
| tyrosyl-trna synthetase | BK658_18445 | Not Available | Negative | 3963780 - 3964325 | 18984.1 |
| sam-dependent methyltransferase | BK658_18450 | Not Available | Positive | 3964870 - 3965916 | 37426.4 |
| hypothetical protein | BK658_18455 | Not Available | Negative | 3965971 - 3966756 | 27632.8 |
| abc transporter substrate-binding protein | BK658_18460 | Not Available | Positive | 3967043 - 3967819 | 28036.2 |
| abc transporter | BK658_18465 | Not Available | Positive | 3968005 - 3968694 | 24696.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
