Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucyl/phenylalanyl-trna--protein transferase | BK658_18165 | Not Available | Positive | 3896907 - 3897587 | 25341.3 |
| arginyltransferase | BK658_18170 | Not Available | Positive | 3897646 - 3898353 | 27784.2 |
| translation initiation factor if-1 | BK658_18175 | Not Available | Positive | 3898465 - 3898683 | 8303.06 |
| atp-dependent clp protease atp-binding subunit clpa | BK658_18180 | Not Available | Negative | 3899687 - 3901957 | 83423.0 |
| atp-dependent clp protease adapter clps | BK658_18185 | Not Available | Negative | 3901987 - 3902349 | 13579.2 |
| cold shock domain protein cspd | BK658_18190 | Not Available | Positive | 3902573 - 3902836 | 9348.11 |
| nadp-dependent isocitrate dehydrogenase | BK658_18195 | Not Available | Negative | 3902917 - 3904173 | 45458.9 |
| isocitrate dehydrogenase (nadp(+)) | BK658_18200 | Not Available | Positive | 3904677 - 3906902 | 79950.6 |
| nudix hydrolase | BK658_18205 | Not Available | Positive | 3907115 - 3907561 | 16732.9 |
| trna 2-thiouridine(34) synthase mnma | BK658_18210 | Not Available | Positive | 3907621 - 3908754 | 42014.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
