Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3606 domain-containing protein | BK658_17600 | Not Available | Positive | 3811310 - 3811486 | 6753.12 |
| hypothetical protein | BK658_17605 | Not Available | Positive | 3811882 - 3812553 | 24909.7 |
| Trna-leu | Not Available | Not Available | Positive | 3864668 - 3864754 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 3864948 - 3865021 | Not Available |
| sodium:proton antiporter | BK658_17985 | Not Available | Positive | 3865427 - 3866101 | 24511.2 |
| glutamine synthetase | BK658_17990 | Not Available | Negative | 3866149 - 3867495 | 50089.0 |
| cro/cl family transcriptional regulator | BK658_17995 | Not Available | Negative | 3867519 - 3868076 | 20689.6 |
| fad-dependent oxidoreductase | BK658_18000 | Not Available | Negative | 3868102 - 3869391 | 47126.2 |
| cupin | BK658_18005 | Not Available | Negative | 3869541 - 3870065 | 19169.9 |
| pyridine nucleotide-disulfide oxidoreductase | BK658_18010 | Not Available | Positive | 3870280 - 3871821 | 56112.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
