Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_17450 | Not Available | Positive | 3785042 - 3785323 | 9735.56 |
| hypothetical protein | BK658_17455 | Not Available | Negative | 3785344 - 3785574 | 8734.37 |
| hypothetical protein | BK658_17460 | Not Available | Negative | 3785711 - 3786067 | 12331.9 |
| hypothetical protein | BK658_17465 | Not Available | Positive | 3786279 - 3786581 | 11415.8 |
| proline hydroxylase | BK658_17470 | Not Available | Positive | 3786951 - 3787667 | 27092.6 |
| alpha-ketoglutarate-dependent dioxygenase alkb | BK658_17475 | Not Available | Positive | 3787657 - 3788334 | 25192.5 |
| bifunctional transcriptional activator/dna repair enzyme protein ada | BK658_17480 | Not Available | Positive | 3788424 - 3789485 | 38516.7 |
| arac family transcriptional regulator | BK658_17485 | Not Available | Negative | 3789482 - 3789940 | 16780.8 |
| 2-nitropropane dioxygenase | BK658_17490 | Not Available | Positive | 3790123 - 3791187 | 37851.6 |
| molybdate abc transporter substrate-binding protein | BK658_17495 | Not Available | Positive | 3791527 - 3792294 | 26955.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
