Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK658_17400 | Not Available | Positive | 3774860 - 3775732 | 32120.9 |
| cyclic diguanylate phosphodiesterase | BK658_17405 | Not Available | Positive | 3775866 - 3777401 | 57041.1 |
| transcriptional regulator | BK658_17410 | Not Available | Positive | 3777648 - 3778010 | 13491.2 |
| duf4946 domain-containing protein | BK658_17415 | Not Available | Negative | 3778205 - 3778744 | 19843.8 |
| lactoylglutathione lyase | BK658_17420 | Not Available | Positive | 3778934 - 3779455 | 19622.3 |
| alkyl hydroperoxide reductase subunit f | BK658_17425 | Not Available | Negative | 3779642 - 3781204 | 55825.2 |
| peroxiredoxin | BK658_17430 | Not Available | Negative | 3781328 - 3781891 | 20443.3 |
| glutathione-disulfide reductase | BK658_17435 | Not Available | Negative | 3782132 - 3783490 | 49428.5 |
| utp--glucose-1-phosphate uridylyltransferase | BK658_17440 | Not Available | Negative | 3783621 - 3784460 | 31068.6 |
| hypothetical protein | BK658_17445 | Not Available | Positive | 3784716 - 3784904 | 6583.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
