Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper resistance protein copd | BK658_17035 | Not Available | Positive | 3687939 - 3688817 | 31542.6 |
| multidrug transporter emra | BK658_17040 | Not Available | Negative | 3688848 - 3689999 | 40743.7 |
| mfs transporter | BK658_17045 | Not Available | Negative | 3689996 - 3691663 | 59626.0 |
| hypothetical protein | BK658_17050 | Not Available | Negative | 3691747 - 3692547 | 27422.8 |
| pyridine nucleotide-disulfide oxidoreductase | BK658_17055 | Not Available | Negative | 3692557 - 3693801 | 45560.2 |
| transcriptional regulator | BK658_17060 | Not Available | Negative | 3693840 - 3694175 | 12100.7 |
| mbl fold metallo-hydrolase | BK658_17065 | Not Available | Positive | 3694279 - 3695142 | 31667.6 |
| arsr family transcriptional regulator | BK658_17070 | Not Available | Negative | 3695169 - 3695657 | 18079.2 |
| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha | BK658_17075 | Not Available | Positive | 3695845 - 3697080 | 45140.9 |
| alpha-ketoacid dehydrogenase subunit beta | BK658_17080 | Not Available | Positive | 3697082 - 3698140 | 38572.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
