Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isocitrate dehydrogenase (nadp(+)) | BK654_07105 | Not Available | Positive | 1664134 - 1666359 | 80215.9 |
| nudix hydrolase | BK654_07110 | Not Available | Positive | 1666572 - 1667018 | 16760.8 |
| trna 2-thiouridine(34) synthase mnma | BK654_07115 | Not Available | Positive | 1667078 - 1668202 | 41676.5 |
| lysogenization regulator hfld | BK654_07120 | Not Available | Positive | 1668199 - 1668822 | 23103.2 |
| adenylosuccinate lyase | BK654_07125 | Not Available | Positive | 1668947 - 1670317 | 50715.7 |
| cupin | BK654_07130 | Not Available | Positive | 1670401 - 1671567 | 43915.0 |
| gnat family n-acetyltransferase | BK654_07135 | Not Available | Positive | 1671560 - 1671985 | 15840.9 |
| secretin | BK654_07140 | Not Available | Positive | 1672229 - 1672990 | 27600.4 |
| isocitrate lyase | BK654_07145 | Not Available | Positive | 1673477 - 1674802 | 48529.2 |
| methyl-accepting chemotaxis protein | BK654_07150 | Not Available | Negative | 1674919 - 1676841 | 69024.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
