Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein iolh | BK658_16720 | Not Available | Positive | 3620792 - 3621655 | 33074.4 |
| oxidoreductase | BK658_16725 | Not Available | Positive | 3621777 - 3622829 | 38082.0 |
| rhizopine-binding protein | BK658_16730 | Not Available | Positive | 3623199 - 3624125 | 33372.3 |
| d-xylose abc transporter atp-binding protein | BK658_16735 | Not Available | Positive | 3624196 - 3625761 | 56959.8 |
| abc transporter | BK658_16740 | Not Available | Positive | 3625938 - 3626960 | 35461.6 |
| conjugal transfer protein trar | BK658_16745 | Not Available | Positive | 3627372 - 3627776 | 15471.2 |
| chemotaxis protein | BK658_16750 | Not Available | Positive | 3627992 - 3629602 | 58207.1 |
| hypothetical protein | BK658_16755 | Not Available | Positive | 3629738 - 3629941 | 7054.41 |
| hypothetical protein | BK658_16760 | Not Available | Negative | 3629984 - 3630214 | 8462.13 |
| hypothetical protein | BK658_16765 | Not Available | Negative | 3630374 - 3630565 | 7134.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
