Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | BK658_16670 | Not Available | Negative | 3608504 - 3609115 | 22560.3 |
| patatin | BK658_16675 | Not Available | Positive | 3609248 - 3610150 | 31463.3 |
| rpir family transcriptional regulator | BK658_16680 | Not Available | Negative | 3610123 - 3611043 | 34408.1 |
| 5-dehydro-2-deoxygluconokinase | BK658_16685 | Not Available | Positive | 3611356 - 3613293 | 71154.5 |
| myo-inosose-2 dehydratase | BK658_16690 | Not Available | Positive | 3613445 - 3614338 | 32689.9 |
| 5-deoxy-glucuronate isomerase | BK658_16695 | Not Available | Positive | 3614335 - 3615144 | 29400.7 |
| methylmalonate-semialdehyde dehydrogenase (acylating) | BK658_16700 | Not Available | Positive | 3615175 - 3616677 | 53683.5 |
| xylose isomerase | BK658_16705 | Not Available | Positive | 3616705 - 3617526 | 30003.0 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | BK658_16710 | Not Available | Positive | 3617674 - 3619605 | 70357.2 |
| inositol 2-dehydrogenase | BK658_16715 | Not Available | Positive | 3619636 - 3620661 | 36923.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
