Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma | BK658_16620 | Not Available | Negative | 3598230 - 3598742 | 19352.3 |
| metallophosphoesterase | BK658_16625 | Not Available | Positive | 3598891 - 3599862 | 34957.4 |
| amidase | BK658_16630 | Not Available | Positive | 3599876 - 3600196 | 11845.4 |
| hypothetical protein | BK658_16635 | Not Available | Negative | 3600646 - 3600915 | 9532.53 |
| hypothetical protein | BK658_16640 | Not Available | Negative | 3601106 - 3601672 | 20412.5 |
| duf1338 domain-containing protein | BK658_16645 | Not Available | Negative | 3601816 - 3603213 | 52136.8 |
| glycolate oxidase iron-sulfur subunit | BK658_16650 | Not Available | Negative | 3603324 - 3604541 | 44138.3 |
| glycolate oxidase subunit glce | BK658_16655 | Not Available | Negative | 3604545 - 3605603 | 38176.6 |
| glycolate oxidase subunit glcd | BK658_16660 | Not Available | Negative | 3605603 - 3607102 | 53883.3 |
| diguanylate cyclase adra | BK658_16665 | Not Available | Positive | 3607366 - 3608439 | 39306.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
