Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_16470 | Not Available | Negative | 3565077 - 3565871 | 29182.3 |
| hypothetical protein | BK658_16475 | Not Available | Negative | 3565843 - 3566091 | 9279.09 |
| sugar abc transporter substrate-binding protein | BK658_16480 | Not Available | Positive | 3566538 - 3567095 | 19643.0 |
| hypothetical protein | BK658_16485 | Not Available | Positive | 3567122 - 3568237 | 40363.8 |
| lipopolysaccharide biosynthesis protein | BK658_16490 | Not Available | Positive | 3568258 - 3569808 | 58044.7 |
| protein tyrosine kinase | BK658_16495 | Not Available | Positive | 3569877 - 3570626 | 27561.6 |
| udp-glucose 4-epimerase gale | BK658_16500 | Not Available | Negative | 3570671 - 3571648 | 35545.2 |
| glycosyl hydrolase family 5 | BK658_16505 | Not Available | Negative | 3571736 - 3574414 | 98928.8 |
| ligase | BK658_16510 | Not Available | Negative | 3574420 - 3575946 | 56391.5 |
| polysaccharide biosynthesis protein | BK658_16515 | Not Available | Positive | 3576043 - 3577419 | 49994.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
