Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urea abc transporter atp-binding protein urtd | BK658_16210 | Not Available | Positive | 3504262 - 3505131 | 31394.9 |
| urea abc transporter atp-binding subunit urte | BK658_16215 | Not Available | Positive | 3505261 - 3505959 | 25528.4 |
| urease accessory protein | BK658_16220 | Not Available | Positive | 3505990 - 3506841 | 31103.2 |
| urease subunit gamma | BK658_16225 | Not Available | Positive | 3507014 - 3507316 | 11093.6 |
| gnat family n-acetyltransferase | BK658_16230 | Not Available | Positive | 3507326 - 3507859 | 19652.3 |
| gnat family n-acetyltransferase | BK658_16235 | Not Available | Positive | 3507866 - 3508399 | 19740.5 |
| urease subunit beta | BK658_16240 | Not Available | Positive | 3508396 - 3508704 | 11246.3 |
| urease subunit alpha | BK658_16245 | Not Available | Positive | 3508836 - 3510536 | 60590.4 |
| hypothetical protein | BK658_16250 | Not Available | Negative | 3510608 - 3515896 | 199773.0 |
| two-component sensor histidine kinase | BK658_16255 | Not Available | Positive | 3516148 - 3517284 | 41199.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
