Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase biotin carboxylase subunit | BK658_16055 | Not Available | Positive | 3469412 - 3470773 | 49008.0 |
| ribosomal protein l11 methyltransferase | BK658_16060 | Not Available | Positive | 3471112 - 3471990 | 31752.6 |
| hypothetical protein | BK658_16065 | Not Available | Positive | 3472021 - 3473280 | 47098.1 |
| trna dihydrouridine synthase dusb | BK658_16070 | Not Available | Positive | 3473478 - 3474488 | 36408.9 |
| fis family transcriptional regulator | BK658_16075 | Not Available | Positive | 3474485 - 3474805 | 11676.0 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | BK658_16080 | Not Available | Positive | 3474888 - 3476495 | 57489.8 |
| phosphoribosylamine--glycine ligase | BK658_16085 | Not Available | Positive | 3476648 - 3477943 | 45593.7 |
| hybrid sensor histidine kinase/response regulator | BK658_16090 | Not Available | Positive | 3478043 - 3480820 | 101926.0 |
| hypothetical protein | BK658_16095 | Not Available | Positive | 3480885 - 3481481 | 21457.0 |
| hypothetical protein | BK658_16100 | Not Available | Negative | 3481571 - 3482221 | 24233.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
