Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion protein | BK658_16005 | Not Available | Negative | 3456418 - 3457800 | 50806.5 |
| arginine decarboxylase | BK658_16010 | Not Available | Negative | 3458034 - 3459947 | 71046.5 |
| translation initiation factor | BK658_16015 | Not Available | Negative | 3460167 - 3460538 | 12642.5 |
| nudix hydrolase | BK658_16020 | Not Available | Negative | 3460731 - 3461300 | 20836.7 |
| hypothetical protein | BK658_16025 | Not Available | Negative | 3461304 - 3462371 | 39485.9 |
| diguanylate cyclase response regulator | BK658_16030 | Not Available | Positive | 3462663 - 3464333 | 62893.3 |
| chemotaxis protein | BK658_16035 | Not Available | Positive | 3464386 - 3466347 | 69308.8 |
| protein-disulfide reductase dsbd | BK658_16040 | Not Available | Positive | 3466540 - 3468303 | 63139.5 |
| type ii 3-dehydroquinate dehydratase | BK658_16045 | Not Available | Positive | 3468435 - 3468887 | 16400.7 |
| acetyl-coa carboxylase, biotin carboxyl carrier protein | BK658_16050 | Not Available | Positive | 3468936 - 3469394 | 16173.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
