Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein tade | BK658_15955 | Not Available | Positive | 3445986 - 3446432 | 15829.2 |
| pas domain-containing sensor histidine kinase | BK658_15960 | Not Available | Positive | 3446429 - 3449194 | 103975.0 |
| hypothetical protein | BK658_15965 | Not Available | Negative | 3449179 - 3451110 | 65614.4 |
| hypothetical protein | BK658_15970 | Not Available | Negative | 3451286 - 3451843 | 20767.5 |
| hypothetical protein | BK658_15975 | Not Available | Negative | 3451872 - 3452480 | 22035.8 |
| sam-dependent methyltransferase | BK658_15980 | Not Available | Negative | 3452505 - 3453254 | 28332.3 |
| nucleotide pyrophosphohydrolase | BK658_15985 | Not Available | Negative | 3453254 - 3453556 | 11555.9 |
| hypothetical protein | BK658_15990 | Not Available | Positive | 3453868 - 3454161 | 10620.4 |
| mate family efflux transporter | BK658_15995 | Not Available | Positive | 3454263 - 3455603 | 48317.1 |
| hypothetical protein | BK658_16000 | Not Available | Negative | 3455636 - 3456421 | 29712.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
