Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | BK658_15905 | Not Available | Negative | 3437196 - 3437609 | 15520.7 |
| pilin | BK658_15910 | Not Available | Negative | 3437720 - 3437926 | 7307.32 |
| flp pilus assembly protein cpab | BK658_15915 | Not Available | Positive | 3438255 - 3439184 | 33082.9 |
| pilus assembly protein | BK658_15920 | Not Available | Positive | 3439244 - 3440434 | 43080.1 |
| atpase | BK658_15925 | Not Available | Positive | 3440431 - 3441705 | 47262.5 |
| type ii secretion system protein f | BK658_15930 | Not Available | Positive | 3441724 - 3442608 | 33452.0 |
| type ii secretion system protein f | BK658_15935 | Not Available | Positive | 3442610 - 3443494 | 32490.3 |
| hypothetical protein | BK658_15940 | Not Available | Negative | 3443551 - 3443940 | 14235.8 |
| dna-binding response regulator | BK658_15945 | Not Available | Negative | 3444548 - 3445315 | 28511.2 |
| prepilin peptidase | BK658_15950 | Not Available | Negative | 3445440 - 3445910 | 16967.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
