Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (uridine(54)-c5)-methyltransferase trma | BK658_15855 | Not Available | Positive | 3425529 - 3426608 | 40687.4 |
| serine protein kinase rio | BK658_15860 | Not Available | Negative | 3426664 - 3427557 | 33095.5 |
| hypothetical protein | BK658_15865 | Not Available | Positive | 3427894 - 3428190 | 10953.0 |
| arac family transcriptional regulator | BK658_15870 | Not Available | Negative | 3428327 - 3429118 | 29515.3 |
| bile acid:sodium symporter | BK658_15875 | Not Available | Positive | 3429202 - 3430230 | 36905.6 |
| acetyl-coa acetyltransferase | BK658_15880 | Not Available | Negative | 3430217 - 3431494 | 45470.8 |
| 3-oxoacyl-acp reductase | BK658_15885 | Not Available | Positive | 3431799 - 3433151 | 47205.9 |
| acyl dehydratase | BK658_15890 | Not Available | Positive | 3433154 - 3434008 | 31366.2 |
| hypothetical protein | BK658_15895 | Not Available | Negative | 3434029 - 3434478 | 15843.1 |
| autotransporter outer membrane beta-barrel domain-containing protein | BK658_15900 | Not Available | Negative | 3434590 - 3437001 | 83297.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
