Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin--nadp(+) reductase | BK658_15805 | Not Available | Negative | 3415350 - 3416126 | 29357.3 |
| hypothetical protein | BK658_15810 | Not Available | Positive | 3416470 - 3417186 | 26935.2 |
| 50s rrna methyltransferase | BK658_15815 | Not Available | Positive | 3417390 - 3418514 | 40562.1 |
| duf2474 domain-containing protein | BK658_15820 | Not Available | Negative | 3418599 - 3418766 | 6258.82 |
| cytochrome d ubiquinol oxidase subunit ii | BK658_15825 | Not Available | Negative | 3418835 - 3419842 | 37288.6 |
| cytochrome ubiquinol oxidase subunit i | BK658_15830 | Not Available | Negative | 3419846 - 3421285 | 53505.5 |
| mfs transporter | BK658_15835 | Not Available | Positive | 3421682 - 3422965 | 45551.7 |
| dj-1 family protein | BK658_15840 | Not Available | Negative | 3422931 - 3423482 | 19240.8 |
| duf4879 domain-containing protein | BK658_15845 | Not Available | Negative | 3423563 - 3424021 | 15872.0 |
| guanine permease | BK658_15850 | Not Available | Positive | 3424237 - 3425532 | 44748.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
