Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | BK658_15755 | Not Available | Positive | 3405462 - 3406166 | 25498.6 |
| gntr family transcriptional regulator | BK658_15760 | Not Available | Positive | 3406211 - 3406939 | 27118.5 |
| gtp-binding protein | BK658_15765 | Not Available | Negative | 3407070 - 3408041 | 35870.2 |
| hypothetical protein | BK658_15770 | Not Available | Negative | 3408222 - 3408419 | 7508.05 |
| carbon starvation protein a | BK658_15775 | Not Available | Negative | 3408435 - 3410501 | 74031.5 |
| pilz domain-containing protein | BK658_15780 | Not Available | Positive | 3410643 - 3411023 | 14622.5 |
| dna repair protein rada | BK658_15785 | Not Available | Negative | 3411032 - 3412399 | 48701.2 |
| hypothetical protein | BK658_15790 | Not Available | Negative | 3412445 - 3412999 | 19585.4 |
| catalase | BK658_15795 | Not Available | Negative | 3413064 - 3414605 | 56785.7 |
| large-conductance mechanosensitive channel | BK658_15800 | Not Available | Positive | 3414891 - 3415304 | 14409.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
