Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase obge | BK658_15655 | Not Available | Negative | 3381665 - 3382888 | 44830.8 |
| 50s ribosomal protein l27 | BK658_15660 | Not Available | Negative | 3383084 - 3383341 | 9220.31 |
| 50s ribosomal protein l21 | BK658_15665 | Not Available | Negative | 3383377 - 3383691 | 11618.3 |
| octaprenyl-diphosphate synthase | BK658_15670 | Not Available | Positive | 3383932 - 3384900 | 35008.2 |
| alkylphosphonate utilization protein | BK658_15675 | Not Available | Positive | 3385084 - 3385425 | 12227.6 |
| hypothetical protein | BK658_15680 | Not Available | Positive | 3385631 - 3385888 | 9874.91 |
| peptidylprolyl isomerase | BK658_15685 | Not Available | Negative | 3386033 - 3386650 | 21738.6 |
| hypothetical protein | BK658_15690 | Not Available | Negative | 3386781 - 3387071 | 10529.6 |
| hypothetical protein | BK658_15695 | Not Available | Negative | 3387220 - 3387708 | 18307.9 |
| hypothetical protein | BK658_15700 | Not Available | Positive | 3387870 - 3389699 | 67890.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
