Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general secretion pathway protein gsph | BK658_15605 | Not Available | Positive | 3371146 - 3371694 | 19495.2 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | BK658_15610 | Not Available | Negative | 3371671 - 3372618 | 34460.0 |
| peptidylprolyl isomerase | BK658_15615 | Not Available | Negative | 3372837 - 3373289 | 16346.3 |
| signal peptidase ii | BK658_15620 | Not Available | Negative | 3373282 - 3373794 | 19034.2 |
| isoleucine--trna ligase | BK658_15625 | Not Available | Negative | 3373787 - 3376618 | 105556.0 |
| riboflavin biosynthesis protein ribf | BK658_15630 | Not Available | Negative | 3376632 - 3377570 | 34082.2 |
| murein biosynthesis integral membrane protein murj | BK658_15635 | Not Available | Negative | 3377700 - 3379238 | 55897.6 |
| 30s ribosomal protein s20 | BK658_15640 | Not Available | Positive | 3379489 - 3379764 | 9957.23 |
| hypothetical protein | BK658_15645 | Not Available | Negative | 3379947 - 3380411 | 16870.6 |
| glutamate 5-kinase | BK658_15650 | Not Available | Negative | 3380423 - 3381541 | 39674.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
