Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_15555 | Not Available | Positive | 3360940 - 3361173 | 8970.85 |
| pas domain-containing sensor histidine kinase | BK658_15560 | Not Available | Positive | 3361163 - 3362752 | 58379.8 |
| sigma-54-dependent fis family transcriptional regulator | BK658_15565 | Not Available | Positive | 3362749 - 3364095 | 49885.4 |
| glycine oxidase thio | BK658_15570 | Not Available | Negative | 3364182 - 3365282 | 39076.0 |
| pilus assembly protein | BK658_15575 | Not Available | Negative | 3365340 - 3365741 | 14477.4 |
| pilus assembly protein | BK658_15580 | Not Available | Negative | 3365757 - 3368918 | 110808.0 |
| pilus assembly protein pilx | BK658_15585 | Not Available | Negative | 3368905 - 3369384 | 16393.8 |
| pilus assembly protein pilw | BK658_15590 | Not Available | Negative | 3369396 - 3370106 | 24860.9 |
| type iv pilus modification protein pilv | BK658_15595 | Not Available | Negative | 3370103 - 3370552 | 15787.7 |
| general secretion pathway protein gsph | BK658_15600 | Not Available | Negative | 3370549 - 3371022 | 16328.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
