Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prepilin peptidase | BK658_15455 | Not Available | Positive | 3344625 - 3345497 | 31978.9 |
| dephospho-coa kinase | BK658_15460 | Not Available | Positive | 3345494 - 3346117 | 23061.7 |
| dna gyrase inhibitor yacg | BK658_15465 | Not Available | Positive | 3346114 - 3346314 | 7394.49 |
| hypothetical protein | BK658_15470 | Not Available | Negative | 3346324 - 3346539 | 8033.39 |
| hypothetical protein | BK658_15475 | Not Available | Negative | 3346603 - 3347289 | 25559.9 |
| lysr family transcriptional regulator | BK658_15480 | Not Available | Negative | 3347420 - 3348352 | 34942.1 |
| hypothetical protein | BK658_15485 | Not Available | Positive | 3348474 - 3348719 | 8431.12 |
| porin | BK658_15490 | Not Available | Negative | 3348728 - 3350002 | 46351.4 |
| hypothetical protein | BK658_15495 | Not Available | Positive | 3350260 - 3350886 | 24226.0 |
| duf3094 domain-containing protein | BK658_15500 | Not Available | Positive | 3351114 - 3351287 | 6694.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
