Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate isomerase | BK658_15405 | Not Available | Positive | 3330940 - 3332604 | 61439.2 |
| acetate--coa ligase | BK658_15410 | Not Available | Positive | 3332796 - 3334733 | 71629.1 |
| histidine kinase | BK658_15415 | Not Available | Positive | 3334805 - 3335677 | 32472.3 |
| sam-dependent methyltransferase | BK658_15420 | Not Available | Positive | 3335852 - 3336868 | 37695.0 |
| hypothetical protein | BK658_15425 | Not Available | Positive | 3336975 - 3339917 | 107376.0 |
| hypothetical protein | BK658_15430 | Not Available | Positive | 3339920 - 3340219 | 11103.3 |
| phospholipid-binding protein | BK658_15435 | Not Available | Negative | 3340393 - 3340749 | 12187.8 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | BK658_15440 | Not Available | Negative | 3341064 - 3341474 | 13826.8 |
| type iv-a pilus assembly atpase pilb | BK658_15445 | Not Available | Positive | 3341701 - 3343401 | 62730.3 |
| type ii secretion system protein f | BK658_15450 | Not Available | Positive | 3343405 - 3344622 | 44149.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
