Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 1b | BK658_15305 | Not Available | Negative | 3307756 - 3310080 | 85161.2 |
| hypothetical protein | BK658_15310 | Not Available | Positive | 3310198 - 3311754 | 57603.0 |
| hypothetical protein | BK658_15315 | Not Available | Positive | 3311845 - 3312189 | 12790.1 |
| competence protein tfox | BK658_15320 | Not Available | Positive | 3312415 - 3312687 | 10131.2 |
| iron(iii) abc transporter | BK658_15325 | Not Available | Negative | 3312943 - 3313794 | 30902.3 |
| heme abc transporter atp-binding protein | BK658_15330 | Not Available | Negative | 3313804 - 3314571 | 27975.0 |
| abc transporter permease | BK658_15335 | Not Available | Negative | 3314571 - 3315608 | 35410.7 |
| hemin abc transporter substrate-binding protein | BK658_15340 | Not Available | Negative | 3315605 - 3316492 | 30763.1 |
| rieske (2fe-2s) protein | BK658_15345 | Not Available | Positive | 3316678 - 3316995 | 11546.7 |
| sugar fermentation stimulation protein sfsa | BK658_15350 | Not Available | Negative | 3317008 - 3317721 | 25937.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
