Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK658_14755 | Not Available | Negative | 3201526 - 3202449 | 33556.3 |
| oxidoreductase | BK658_14760 | Not Available | Positive | 3202575 - 3203321 | 25229.2 |
| had family hydrolase | BK658_14765 | Not Available | Negative | 3203403 - 3204095 | 25027.1 |
| cytotoxic translational repressor of toxin-antitoxin stability system | BK658_14770 | Not Available | Positive | 3204351 - 3204605 | 9986.06 |
| transcriptional regulator | BK658_14775 | Not Available | Positive | 3204586 - 3204912 | 12014.4 |
| bacteriocin | BK658_14780 | Not Available | Negative | 3205044 - 3205388 | 9757.98 |
| hypothetical protein | BK658_14785 | Not Available | Negative | 3205752 - 3205943 | 6801.19 |
| hypothetical protein | BK658_14790 | Not Available | Negative | 3206134 - 3206454 | 11498.9 |
| hypothetical protein | BK658_14795 | Not Available | Positive | 3206571 - 3206765 | 7283.85 |
| hypothetical protein | BK658_14800 | Not Available | Negative | 3206799 - 3207788 | 36326.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
