Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe/s-dependent 2-methylisocitrate dehydratase acnd | BK658_14705 | Not Available | Negative | 3189152 - 3191746 | 94438.7 |
| 2-methylcitrate synthase | BK658_14710 | Not Available | Negative | 3191951 - 3193078 | 41941.3 |
| methylisocitrate lyase | BK658_14715 | Not Available | Negative | 3193222 - 3194115 | 32203.6 |
| gntr family transcriptional regulator | BK658_14720 | Not Available | Negative | 3194112 - 3194834 | 27260.5 |
| atp-dependent zinc protease | BK658_14725 | Not Available | Positive | 3195105 - 3195641 | 19554.7 |
| hypothetical protein | BK658_14730 | Not Available | Positive | 3195647 - 3197179 | 56576.8 |
| alpha-l-glutamate ligase-like protein | BK658_14735 | Not Available | Positive | 3197179 - 3198165 | 36481.4 |
| aminodeoxychorismate synthase, component i | BK658_14740 | Not Available | Positive | 3198389 - 3199732 | 48562.8 |
| phosphoserine phosphatase | BK658_14745 | Not Available | Negative | 3199859 - 3200476 | 23491.3 |
| phosphoadenosine phosphosulfate reductase | BK658_14750 | Not Available | Positive | 3200651 - 3201385 | 27989.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
