Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter | BK658_14655 | Not Available | Negative | 3178779 - 3179603 | 29062.6 |
| crfx protein | BK658_14660 | Not Available | Negative | 3179606 - 3179851 | 8812.6 |
| zinc transporter zntb | BK658_14665 | Not Available | Negative | 3179915 - 3180910 | 38238.2 |
| ribonuclease activity regulator protein rraa | BK658_14670 | Not Available | Negative | 3180937 - 3181428 | 17686.3 |
| alpha/beta hydrolase | BK658_14675 | Not Available | Negative | 3181616 - 3182605 | 36303.3 |
| phosphoenolpyruvate synthase | BK658_14680 | Not Available | Negative | 3182708 - 3185083 | 86027.1 |
| hypothetical protein | BK658_14685 | Not Available | Positive | 3185042 - 3185245 | 7126.12 |
| phosphoenolpyruvate synthase regulatory protein | BK658_14690 | Not Available | Positive | 3185260 - 3186078 | 31001.9 |
| 2-methylcitrate dehydratase | BK658_14695 | Not Available | Negative | 3186221 - 3187705 | 54769.9 |
| putative methylaconitate delta-isomerase prpf | BK658_14700 | Not Available | Negative | 3187906 - 3189096 | 41345.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
