Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate transporter | BK658_14605 | Not Available | Positive | 3165116 - 3166327 | 44063.4 |
| response regulator | BK658_14610 | Not Available | Positive | 3166343 - 3166918 | 21536.4 |
| mfs transporter | BK658_14615 | Not Available | Positive | 3167258 - 3168469 | 42794.9 |
| protein kinase | BK658_14620 | Not Available | Positive | 3168477 - 3170147 | 61734.8 |
| nitrite reductase large subunit | BK658_14625 | Not Available | Positive | 3170639 - 3173092 | 89786.1 |
| nitrite reductase | BK658_14630 | Not Available | Positive | 3173089 - 3173406 | 11397.6 |
| nitrate reductase | BK658_14635 | Not Available | Positive | 3173406 - 3176123 | 99015.2 |
| uroporphyrinogen-iii c-methyltransferase | BK658_14640 | Not Available | Positive | 3176134 - 3176907 | 27314.0 |
| porin | BK658_14645 | Not Available | Negative | 3177013 - 3177990 | 34694.2 |
| rna polymerase subunit sigma | BK658_14650 | Not Available | Negative | 3178098 - 3178664 | 22416.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
