Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase molybdopterin binding subunit | BK658_14555 | Not Available | Positive | 3148457 - 3150850 | 87731.6 |
| xanthine dehydrogenase accessory protein xdhc | BK658_14560 | Not Available | Positive | 3150979 - 3151821 | 30547.1 |
| guanine deaminase | BK658_14565 | Not Available | Positive | 3151846 - 3153150 | 47885.1 |
| gntr family transcriptional regulator | BK658_14570 | Not Available | Negative | 3153233 - 3153997 | 28127.6 |
| hypothetical protein | BK658_14575 | Not Available | Positive | 3154346 - 3155536 | 41146.0 |
| hypothetical protein | BK658_14580 | Not Available | Negative | 3155623 - 3155967 | 12726.1 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | BK658_14585 | Not Available | Positive | 3156199 - 3157659 | 52380.2 |
| ggdef domain-containing protein | BK658_14590 | Not Available | Negative | 3157809 - 3160208 | 88860.8 |
| 23s rrna (guanine(2445)-n(2))/(guanine(2069)-n(7))- methyltransferase | BK658_14595 | Not Available | Negative | 3160347 - 3162617 | 85212.0 |
| dihydroorotate dehydrogenase (quinone) | BK658_14600 | Not Available | Negative | 3163689 - 3164708 | 35901.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
