Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| u32 family peptidase | BK658_14405 | Not Available | Positive | 3104156 - 3105493 | 50074.1 |
| chemotaxis protein | BK658_14410 | Not Available | Negative | 3105629 - 3107311 | 59610.9 |
| sodium:proton antiporter | BK658_14415 | Not Available | Negative | 3107385 - 3108704 | 45899.9 |
| atp-binding protein | BK658_14420 | Not Available | Negative | 3108950 - 3110266 | 48948.3 |
| dna-binding response regulator | BK658_14425 | Not Available | Negative | 3110263 - 3110931 | 24922.9 |
| peptidase | BK658_14430 | Not Available | Negative | 3110931 - 3111245 | 11658.2 |
| hypothetical protein | BK658_14435 | Not Available | Positive | 3111518 - 3112597 | 39454.7 |
| 6-carboxytetrahydropterin synthase qued | BK658_14440 | Not Available | Positive | 3112692 - 3113048 | 13625.3 |
| cytosine deaminase | BK658_14445 | Not Available | Positive | 3113146 - 3114384 | 45553.5 |
| diaminopimelate epimerase | BK658_14450 | Not Available | Negative | 3114515 - 3115507 | 34806.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
