Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein | BK658_14355 | Not Available | Negative | 3096885 - 3097808 | 34036.0 |
| hypothetical protein | BK658_14360 | Not Available | Negative | 3097947 - 3098204 | 8908.28 |
| hypothetical protein | BK658_14365 | Not Available | Negative | 3098355 - 3098597 | 9162.04 |
| universal stress protein | BK658_14370 | Not Available | Positive | 3098989 - 3099915 | 34500.6 |
| hypothetical protein | BK658_14375 | Not Available | Positive | 3100142 - 3100789 | 23787.6 |
| shikimate 5-dehydrogenase | BK658_14380 | Not Available | Negative | 3100818 - 3101636 | 29051.8 |
| hypothetical protein | BK658_14385 | Not Available | Positive | 3101884 - 3102198 | 11182.6 |
| hypothetical protein | BK658_14390 | Not Available | Positive | 3102458 - 3102652 | 7226.83 |
| hypothetical protein | BK658_14395 | Not Available | Positive | 3102759 - 3102941 | 6165.7 |
| ai-2e family transporter | BK658_14400 | Not Available | Negative | 3102938 - 3103999 | 39087.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
