Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | BK658_14200 | Not Available | Negative | 3062510 - 3063664 | 40127.9 |
| serine/threonine transporter sstt | BK658_14205 | Not Available | Positive | 3063990 - 3065222 | 42275.0 |
| hypothetical protein | BK658_14210 | Not Available | Negative | 3065289 - 3065798 | 18783.8 |
| two-component sensor histidine kinase | BK658_14215 | Not Available | Negative | 3065933 - 3067264 | 48253.9 |
| dna-binding response regulator | BK658_14220 | Not Available | Negative | 3067261 - 3067920 | 24472.6 |
| tat pathway signal protein | BK658_14225 | Not Available | Positive | 3068054 - 3068524 | 16748.7 |
| nitric oxide synthase | BK658_14230 | Not Available | Positive | 3068550 - 3070772 | 80145.5 |
| thiamine biosynthesis protein apbe | BK658_14235 | Not Available | Positive | 3070762 - 3071727 | 34584.0 |
| hypothetical protein | BK658_14240 | Not Available | Positive | 3071806 - 3072510 | 23834.8 |
| arginine-ornithine antiporter | BK658_14245 | Not Available | Positive | 3072672 - 3074165 | 53043.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
