Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylcrotonoyl-coa carboxylase | BK658_14000 | Not Available | Positive | 3021575 - 3023182 | 57508.2 |
| gamma-carboxygeranoyl-coa hydratase | BK658_14005 | Not Available | Positive | 3023196 - 3024011 | 30018.0 |
| 3-methylcrotonyl-coa carboxylase | BK658_14010 | Not Available | Positive | 3024011 - 3025960 | 69920.4 |
| cro/cl family transcriptional regulator | BK658_14015 | Not Available | Negative | 3026003 - 3026668 | 24731.8 |
| duf3077 domain-containing protein | BK658_14020 | Not Available | Positive | 3026798 - 3027139 | 12434.5 |
| hypothetical protein | BK658_14025 | Not Available | Positive | 3027662 - 3028813 | 43410.1 |
| cytochrome b | BK658_14030 | Not Available | Negative | 3028969 - 3029511 | 19941.3 |
| catalase | BK658_14035 | Not Available | Negative | 3029508 - 3030599 | 39055.2 |
| rna polymerase subunit sigma-24 | BK658_14040 | Not Available | Positive | 3030760 - 3031266 | 19233.2 |
| anti-sigma factor | BK658_14045 | Not Available | Positive | 3031263 - 3032015 | 27836.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
