Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l25/general stress protein ctc | BK658_13700 | Not Available | Positive | 2957512 - 2958111 | 21089.4 |
| aminoacyl-trna hydrolase | BK658_13705 | Not Available | Positive | 2958281 - 2958865 | 21006.3 |
| redox-regulated atpase ychf | BK658_13710 | Not Available | Positive | 2958889 - 2959989 | 40167.4 |
| mfs transporter | BK658_13715 | Not Available | Negative | 2960175 - 2961392 | 43023.5 |
| chemotaxis protein | BK658_13720 | Not Available | Positive | 2961725 - 2963782 | 72850.5 |
| Trna-met | Not Available | Not Available | Positive | 2963899 - 2963975 | Not Available |
| hypothetical protein | BK658_13730 | Not Available | Negative | 2964088 - 2965191 | 40455.8 |
| gamma-glutamyltransferase | BK658_13735 | Not Available | Positive | 2965382 - 2967226 | 64614.3 |
| alpha/beta hydrolase | BK658_13740 | Not Available | Negative | 2967276 - 2968106 | 30050.2 |
| addiction module toxin rele | BK658_13745 | Not Available | Positive | 2968405 - 2968707 | 11365.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
