Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil permease | BK658_13600 | Not Available | Positive | 2938064 - 2939338 | 44170.7 |
| ferrochelatase | BK658_13605 | Not Available | Negative | 2939470 - 2940492 | 37984.8 |
| tigr01777 family protein | BK658_13610 | Not Available | Negative | 2940506 - 2941408 | 33146.5 |
| fad-dependent oxidoreductase | BK658_13615 | Not Available | Positive | 2941605 - 2942591 | 36017.6 |
| hypothetical protein | BK658_13620 | Not Available | Positive | 2942751 - 2943713 | 35478.9 |
| helix-turn-helix-type transcriptional regulator | BK658_13625 | Not Available | Positive | 2943714 - 2944658 | 35668.2 |
| deoxyribodipyrimidine photolyase | BK658_13630 | Not Available | Positive | 2944659 - 2946125 | 54830.5 |
| short-chain dehydrogenase | BK658_13635 | Not Available | Positive | 2946139 - 2946921 | 27949.7 |
| zinc/iron-chelating domain-containing protein | BK658_13640 | Not Available | Positive | 2947018 - 2947323 | 11306.7 |
| acyloxyacyl hydrolase | BK658_13645 | Not Available | Negative | 2947511 - 2948029 | 19126.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
