Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter substrate-binding protein | BK658_13550 | Not Available | Positive | 2929522 - 2930340 | 29089.5 |
| abc transporter permease | BK658_13555 | Not Available | Positive | 2930436 - 2931101 | 24581.8 |
| amino acid abc transporter | BK658_13560 | Not Available | Positive | 2931111 - 2931761 | 23768.8 |
| glutamine abc transporter atp-binding protein | BK658_13565 | Not Available | Positive | 2931754 - 2932476 | 26237.0 |
| hypothetical protein | BK658_13570 | Not Available | Positive | 2932504 - 2933541 | 36901.3 |
| dihydrodipicolinate synthase family protein | BK658_13575 | Not Available | Positive | 2933638 - 2934555 | 33115.8 |
| aldehyde dehydrogenase (nadp(+)) | BK658_13580 | Not Available | Positive | 2934612 - 2936204 | 55975.5 |
| cupin | BK658_13585 | Not Available | Negative | 2936221 - 2936694 | 17330.6 |
| hypoxanthine-guanine phosphoribosyltransferase | BK658_13590 | Not Available | Negative | 2936698 - 2937255 | 20652.7 |
| uracil phosphoribosyltransferase | BK658_13595 | Not Available | Positive | 2937423 - 2938061 | 22921.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
