Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_13500 | Not Available | Negative | 2920315 - 2920899 | 20705.9 |
| hypothetical protein | BK658_13505 | Not Available | Positive | 2921082 - 2921306 | 8684.53 |
| malate:quinone oxidoreductase | BK658_13510 | Not Available | Positive | 2922056 - 2923564 | 54462.6 |
| hypothetical protein | BK658_13515 | Not Available | Negative | 2923644 - 2923931 | 10874.9 |
| gntr family transcriptional regulator | BK658_13520 | Not Available | Positive | 2924133 - 2924813 | 25503.8 |
| hydroxyproline-2-epimerase | BK658_13525 | Not Available | Positive | 2924920 - 2925855 | 33807.9 |
| d-amino-acid oxidase | BK658_13530 | Not Available | Positive | 2925852 - 2926967 | 39744.8 |
| (2fe-2s)-binding protein | BK658_13535 | Not Available | Positive | 2926964 - 2927200 | 8327.11 |
| fad/nad(p)-binding oxidoreductase | BK658_13540 | Not Available | Positive | 2927197 - 2928465 | 44636.1 |
| arac family transcriptional regulator | BK658_13545 | Not Available | Positive | 2928494 - 2929240 | 27562.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
