Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanine--d-alanine ligase | BK658_13195 | Not Available | Negative | 2856542 - 2857510 | 34326.1 |
| udp-n-acetylmuramate--l-alanine ligase | BK658_13200 | Not Available | Negative | 2857507 - 2858967 | 52559.4 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | BK658_13205 | Not Available | Negative | 2858960 - 2860030 | 37741.1 |
| putative lipid ii flippase ftsw | BK658_13210 | Not Available | Negative | 2860020 - 2861237 | 44363.6 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | BK658_13215 | Not Available | Negative | 2861234 - 2862580 | 47916.6 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | BK658_13220 | Not Available | Negative | 2862586 - 2863668 | 39364.4 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | BK658_13225 | Not Available | Negative | 2863668 - 2865035 | 47054.2 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | BK658_13230 | Not Available | Negative | 2865028 - 2866491 | 52042.0 |
| cell division protein | BK658_13235 | Not Available | Negative | 2866491 - 2868233 | 63034.8 |
| cell division protein ftsl | BK658_13240 | Not Available | Negative | 2868230 - 2868523 | 10872.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
