Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_12995 | Not Available | Negative | 2813120 - 2813461 | 13254.6 |
| serine/threonine protein kinase | BK658_13000 | Not Available | Negative | 2814280 - 2815191 | 32794.9 |
| ribosomal subunit interface protein | BK658_13005 | Not Available | Negative | 2815412 - 2815819 | 15169.7 |
| lysr family transcriptional regulator | BK658_13010 | Not Available | Negative | 2816033 - 2816980 | 35372.5 |
| l-serine ammonia-lyase | BK658_13015 | Not Available | Positive | 2817116 - 2818492 | 49001.8 |
| hypothetical protein | BK658_13020 | Not Available | Positive | 2818759 - 2819076 | 11539.0 |
| phosphate-starvation-inducible protein psie | BK658_13025 | Not Available | Negative | 2819073 - 2819573 | 18393.7 |
| hypothetical protein | BK658_13030 | Not Available | Positive | 2820184 - 2820462 | 10057.9 |
| transcriptional regulator | BK658_13035 | Not Available | Negative | 2820524 - 2820838 | 11882.6 |
| toxin | BK658_13040 | Not Available | Negative | 2820835 - 2821179 | 13196.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
