Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain alpha-keto acid dehydrogenase subunit e2 | BK658_12945 | Not Available | Negative | 2800752 - 2801861 | 39524.3 |
| alpha-ketoacid dehydrogenase subunit beta | BK658_12950 | Not Available | Negative | 2801890 - 2802876 | 35696.6 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | BK658_12955 | Not Available | Negative | 2802869 - 2803966 | 40189.7 |
| amino acid dehydrogenase | BK658_12960 | Not Available | Negative | 2804068 - 2805087 | 35371.5 |
| hypothetical protein | BK658_12965 | Not Available | Positive | 2805272 - 2806075 | 30429.0 |
| maleylacetoacetate isomerase | BK658_12970 | Not Available | Negative | 2806228 - 2806866 | 23714.5 |
| fumarylacetoacetase | BK658_12975 | Not Available | Negative | 2806879 - 2808183 | 47188.1 |
| homogentisate 1,2-dioxygenase | BK658_12980 | Not Available | Negative | 2808187 - 2809491 | 48156.3 |
| iclr family transcriptional regulator | BK658_12985 | Not Available | Positive | 2809657 - 2810463 | 28412.1 |
| hypothetical protein | BK658_12990 | Not Available | Negative | 2810489 - 2812963 | 92614.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
