Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase family protein | BK658_12895 | Not Available | Negative | 2790161 - 2791342 | 42426.6 |
| lysr family transcriptional regulator | BK658_12900 | Not Available | Positive | 2791445 - 2792353 | 33603.6 |
| diguanylate cyclase | BK658_12905 | Not Available | Positive | 2792485 - 2793498 | 38572.8 |
| peptide-methionine (s)-s-oxide reductase | BK658_12910 | Not Available | Negative | 2793506 - 2794213 | 25677.3 |
| cytochrome c biogenesis protein | BK658_12915 | Not Available | Negative | 2794442 - 2796253 | 63495.9 |
| peptide-methionine (r)-s-oxide reductase | BK658_12920 | Not Available | Negative | 2796298 - 2796816 | 18840.4 |
| dna-binding response regulator | BK658_12925 | Not Available | Positive | 2796969 - 2797685 | 27028.7 |
| two-component sensor histidine kinase | BK658_12930 | Not Available | Positive | 2797682 - 2799208 | 55796.3 |
| hypothetical protein | BK658_12935 | Not Available | Positive | 2799469 - 2800173 | 25792.1 |
| hypothetical protein | BK658_12940 | Not Available | Positive | 2800358 - 2800690 | 12109.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
