Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase | BK658_12845 | Not Available | Positive | 2778798 - 2780357 | 54788.9 |
| formate dehydrogenase subunit alpha | BK658_12850 | Not Available | Positive | 2780354 - 2783242 | 105099.0 |
| formate dehydrogenase | BK658_12855 | Not Available | Positive | 2783239 - 2783460 | 8151.75 |
| cation-binding protein | BK658_12860 | Not Available | Positive | 2783838 - 2784296 | 17913.2 |
| lysr family transcriptional regulator | BK658_12865 | Not Available | Negative | 2784444 - 2785328 | 32009.5 |
| mfs transporter | BK658_12870 | Not Available | Positive | 2785433 - 2786677 | 43640.8 |
| two-component sensor histidine kinase | BK658_12875 | Not Available | Negative | 2786780 - 2788117 | 49458.6 |
| dna-binding response regulator | BK658_12880 | Not Available | Negative | 2788126 - 2788836 | 26715.6 |
| hypothetical protein | BK658_12885 | Not Available | Positive | 2789049 - 2789378 | 12551.8 |
| hypothetical protein | BK658_12890 | Not Available | Positive | 2789456 - 2790034 | 21453.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
