Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysin d | BK658_12745 | Not Available | Negative | 2759777 - 2760946 | 41837.3 |
| glycosyl transferase | BK658_12750 | Not Available | Negative | 2760982 - 2762472 | 56498.7 |
| gdp-mannose dehydrogenase | BK658_12755 | Not Available | Negative | 2762539 - 2763855 | 47722.3 |
| peroxide stress protein yaaa | BK658_12760 | Not Available | Negative | 2764659 - 2765438 | 29375.1 |
| hypothetical protein | BK658_12765 | Not Available | Negative | 2765767 - 2766321 | 19082.0 |
| protein-export membrane protein secf | BK658_12770 | Not Available | Negative | 2766440 - 2767354 | 33235.8 |
| protein-export membrane protein secd | BK658_12775 | Not Available | Negative | 2767364 - 2769232 | 67223.5 |
| preprotein translocase subunit yajc | BK658_12780 | Not Available | Negative | 2769296 - 2769631 | 11869.7 |
| trna guanosine(34) transglycosylase tgt | BK658_12785 | Not Available | Negative | 2769675 - 2770808 | 41819.7 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | BK658_12790 | Not Available | Negative | 2770805 - 2771854 | 38177.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
